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THALLINGER LAB
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COMPUTATIONAL BIOLOGY [444.003, 2VO, SS][444.104, 2LU, SS]

LECTURER EXERCISES
Gerhard Thallinger, Julia Feichtinger, Jürgen Hartler Gerhard Thallinger

DESCRIPTION
Introduction to computational biology, methods to sequence based algorithms, multiple sequence alignment, motif discovery, promoter analysis, microRNA target prediction, gene expression analysis, clustering, classification, data integration and meta-analyses, network and systems biology

SCHEDULE
Lectures
Computer Lab

NOTES
Lectures
Computer Lab

LECTURES ON THE WEB
Representations and Algorithms for Computational Molecular Biology
Russ B. Altman, MD, PhD, Professor of Genetics, Bioengineering & Medicine, Stanford University

Computational Molecular Biology
Dr. Doug Brutlag, Professor of Biochemistry & Medicine, Stanford University

Computational Biology: Genomes, Networks, Evolution
Manolis Kellis, Assistant Professor Computational Biology, MIT

TEXTBOOKS
Bioinformatics. Sequence and Genome Analysis.
D.W. Mount · CSHL Press. 2004

Biological sequence analysis: Probabilistic mocles of proteins and nucleic acids
Durbin, Eddy, Krogh, Mitchison · Cambridge University Press. 2000

Computational Molecular Biology
Pavel A. Pevzner · MIT Press 2000

Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins
Baxevanis AD, Ouellette BF (eds) · John Wiley & Sons, New York, 1998

An Introduction to Systems Biology: Design principles of biological circuits
Uri Alon · Chapman&Hall/CRC

Bioinformatics and Computational Biology Solutions using R and Bioconductor
Gentleman, Carey, Huber, Irizarry, Dudoit · Springer 2005

Molecular Biology of the Cell
Alberts, Johnson, Lewis, Raff, Roberts, Walter · Garland Science 2003

Molecular Cell Biology
Lodisch, Berk, Zipursky, Matsudaira, Baltimore, Darnell · W.H. Freeman and Company