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Graz University of Technology · Stremayrgasse 16/I, 8010 Graz, Austria Tel +43-316-873-5343 · Fax +43-316-873-105343 · URL http://genome.tugraz.at · 
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| BIOINFORMATICS IN BIOMEDICINE [MOL.856, 10S, 3SSt VU] |
LECTURER
EXERCISES |
|
Gerhard Thallinger
Bettina Halwachs, Christoph Ober
|
DESCRIPTION |
| Introduction, genetics, internet, biological databases, GenBank sequence database, structure databases, sequence analysis, information retrieval from biological databases, sequence alignment and database searching, phylogenetic analysis, predictive methods using protein sequences, navigating public physical mapping databases. |
EXERCISES [here] |
TEXTBOOKS |
| Computational Methods in Molecular Biology.
Salzberg SL, Searl S, Kasif S (eds). Elsevier, Amsterdam, NL, 1999 (Chapter
1-4) [pdf] Bioinformatics: A practical Guide to the Analysis of Genes and Proteins. Baxevanis AD, Ouellette BF (eds). John Wiley & Sons, New York, 1998 (Chapter 1-5) [pdf] |
DOCUMENTS |
Introduction [pdf]Dayhoff - A Model of Evolutionary Change in Proteins[pdf]Lecture Notes [pdf]Schwartz - Matrices for Detecting Distant Relationships.[pdf]List of questions [pdf]
Henikoff - Amino acid substitution matrices from protein blocks.[pdf]Eddy - Where did the BLOSUM62 alignment score matrix come from?[pdf]Nyakatura - Next Generation Sequencing[pdf]Metzker - Sequencing technologies[pdf]
|