Typical microarray output files for several platforms:
Platform
Software
Typical output file (raw data)
Documentation
Agilent
Feature extraction software (FES)
Agilent file
Agilent file description
Affymetrix
GeneChip® Operating Software (GCOS)
CEL file
CEL file description
Two-color microarrays
GenePix
GPR file
GPR file description